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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863439.1_cds_XP_016515685.1_28007
CDS Infomation

[gene=LOC107832362] [db_xref=GeneID:107832362] [protein=ferric reduction oxidase 6-like isoform X2] [protein_id=XP_016515685.1] [location=complement(join(7725..7894,7976..8405,8491..8746,8846..9122,9209..9536,9655..9889,10580..10783,10887..10945))] [gbkey=CDS]
Sequence

ATGATTGCATTTCTTGCAATTATTCGCCTCGTTCTCTCTGGTAAAGATGAATCCCAAGTG
AAGAAGACTGCAAATAAAGGTCCAAGTTTTCGATTGTGGACATTCCCAGTGCTGGTGGAT
GGACCATTTGGGGTTGTTACAGCTGCAGAAATGATTGGAGTTATACTCTTCTCAGTGTAC
ATCATCTGGGCTGTTATTATGTACAGTATACGGAGTGTTGACCGCTTATCCTCACTTCAT
GTACAAGACATGAAAGAGAAAAGCGCTATGTTGCTGGAGCTAACAGGCCGTCGTTTTGGA
TTCATTGGATTAACCTGCTTAGCATTTTTGTTTATACCTGTTGCACGGGGTTCAGTTCTT
CTTCGAGCTATAGATATCCCATTTGAACATGCCACTCGATATCATGTTTGGCTGGGACAT
ACTACTATGGCTCTTTTTAGCCTTCATGGTCTATTCTATGTGATTGGCTGGGCAATGCGC
GGGTGCCTTGTGGAGGAACTAATCGAGTGGAAAAACGTTGGAATAGCCCATCTTCCAGGA
GTTATCAGCCTTGCAGCTGGTTTATTAATGTGGGTGACTTCACTTCCTGGAGTTAGGAGA
AAAAAATTTGAATTGTTCTTGTATACGCACCAATTATATGTGGTGTTCGTGGTGTTCCTG
GCCTTGCATGTTGGTGACTTCATCTTCATGATGGTTGGTGCTGGGATCTTCCTTTTCATG
CTCGATCGGTTCCTTAGATTCTTCCAGTCGCGAAAGACTGTTGACATACTTTCAGCCACA
TGCTTTCCTTGTGGAACCATTGAACTCGTTCTTTCAAAACCTGCAAATTTACATTACAAC
GCCCTTGGCTGGATATTCTTACAAATACGCGAGTTGTCCTGGCTGCAGTGGCACCCTTTC
AGTGTCTCCTCCAGTCCTCTTGACGGGAAACATCATGTTGCAATTCTCATAAAGGTTCTC
GGAGATTGGACTGAAAAACTGAAGGGACATATCTTGAATCTTTCGGTTGAACAACCTGAG
ATGGAGCCTCTTTTGTTGCATAACAGGATATTAACAGCTTCTGTCGAAGGCCCTTATGGG
CATGAATCACCATATCATTTAACGTATGAAAATCTCATTTTGGTAGCAGGTGGAATTGGC
ATATCTCCTTTCCTAGCTATCCTGAGTGATATCCTCCACCGTATCAACGATAGCAGGCAT
TGCCTGCCAAGAAATATACTAATAGTATGGGCTATAAAAAATTCAGATGAGCTCCCACTC
CTTGAGACAATTGAGATGGAGGCAATCTGTCCACTTTATTCTGATAAACTGAATCTTGAG
ATTCAAACATTTGTGACTCGGGAATCACAACCTTCATTGGAGGAGGGCAAAAGAGCGAAA
ACAATGCACACCTCAATCTCCCCTGGCTTCAGTGGATGTCGAATGTCTAGTTTGGCTGGT
ACTGGAAATGTTGTATGGTCTGGATTGTATGTCATAATATCCACAATTGGGTTGGTGATC
ATTGTAGCATTATTAGACATTTTCTACATCAATCCATTCAATGTAACTTACTGGTGGTAC
AAGGGGCTTTTGTTGATTGGATGCATGGCTGCAAGTGTTGTTATATTTGGGGGTCTCGTG
ATCGCTTTATGGCATCTTTGGGAAAGGAAAACCTCATTGAAGGAGGAACCAGAGGACACC
ACAAAGAAGGTCGACATGCTGCAGCAGCATGAGGCCTCTTTACAGAAGAATCTTGAAGAG
GCTCGATCTGTTAATACTATCCGATATGGTGAAAGACCAGACTTCCAAGAGATATTTGGA
TCACATGCAAAGAGTTGGGGAAGTGTAGATATTGGTGTGATAGTATGTGGTCCTCCTACT
CTTCAGTCCAGTGTTGCTAAAGAGTGCAGAAGGCAAAACTTGCAAAGAAGAGGCCATCAG
GCTATTTTCCATTTCAACAGCCACAGTTTTGACCTCTAA

Peptide Sequence

PEP ID

XP_016515685.1
PEP Infomation

PREDICTED: ferric reduction oxidase 6-like isoform X2 [Nicotiana tabacum]
Sequence

MIAFLAIIRLVLSGKDESQVKKTANKGPSFRLWTFPVLVDGPFGVVTAAEMIGVILFSVY
IIWAVIMYSIRSVDRLSSLHVQDMKEKSAMLLELTGRRFGFIGLTCLAFLFIPVARGSVL
LRAIDIPFEHATRYHVWLGHTTMALFSLHGLFYVIGWAMRGCLVEELIEWKNVGIAHLPG
VISLAAGLLMWVTSLPGVRRKKFELFLYTHQLYVVFVVFLALHVGDFIFMMVGAGIFLFM
LDRFLRFFQSRKTVDILSATCFPCGTIELVLSKPANLHYNALGWIFLQIRELSWLQWHPF
SVSSSPLDGKHHVAILIKVLGDWTEKLKGHILNLSVEQPEMEPLLLHNRILTASVEGPYG
HESPYHLTYENLILVAGGIGISPFLAILSDILHRINDSRHCLPRNILIVWAIKNSDELPL
LETIEMEAICPLYSDKLNLEIQTFVTRESQPSLEEGKRAKTMHTSISPGFSGCRMSSLAG
TGNVVWSGLYVIISTIGLVIIVALLDIFYINPFNVTYWWYKGLLLIGCMAASVVIFGGLV
IALWHLWERKTSLKEEPEDTTKKVDMLQQHEASLQKNLEEARSVNTIRYGERPDFQEIFG
SHAKSWGSVDIGVIVCGPPTLQSSVAKECRRQNLQRRGHQAIFHFNSHSFDL

Transcript Sequence

Gene sequence data has not been registered.